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Rnw | 9 inst/doc/sv | 23 inst/doc/sv | 2419 -------------------- inst/komodo/|binary man/gui Test Report. Maximum, minimum, or an allowable range of differences between units on one variable can be set. Diagnose potential interference between units assigned to different treatment conditions. Diff between block Tools versions 0.3 dated 2009-04-30 and 0.4-1 dated 2009-10-29 CHANGELOG | 6 DESCRIPTION | 10 - R/block. Diff between Bmix versions 0.1 dated 2009-10-27 and 0.2 dated 2009-10-29 DESCRIPTION | 25 ----------- demo/DPreg.

R | 9 inst/doc/Lego Cond |binary inst/doc/|binary inst/doc/|binary inst/doc/coin_|binary inst/documentation/html/Classes_8| 2 inst/documentation/html/Classes_8| 2 inst/documentation/html/Classes_8| 2 inst/documentation/html/Classes_8| 2 inst/documentation/html/Helpers_8| 2 inst/documentation/html/Helpers_8| 2 inst/documentation/html/Helpers_8| 2 inst/documentation/html/Helpers_8| 2 inst/documentation/html/Linear Statistic_8| 2 inst/documentation/html/Linear Statistic_8| 2 inst/documentation/html/Linear Statistic_8| 2 inst/documentation/html/Linear Statistic_8| 2 inst/documentation/html/Streitberg Roehmel_8| 2 inst/documentation/html/Streitberg Roehmel_8| 2 inst/documentation/html/| 2 inst/documentation/html/| 2 inst/documentation/html/coin__common_8| 2 inst/documentation/html/coin__common_8| 2 inst/documentation/html/dir_551893842a8579748e8cac726fc2| 2 inst/documentation/html/| 2 inst/documentation/html/| 2 inst/documentation/html/| 2 inst/documentation/html/functions_| 2 inst/documentation/html/| 12 inst/documentation/html/globals_| 12 inst/documentation/html/globals_| 2 inst/documentation/html/graph_| 2 inst/documentation/html/| 2 inst/documentation/html/structcel | 2 inst/documentation/html/structcel | 4 inst/documentation/html/vande Wiel_8| 174 ----- inst/documentation/html/vande Wiel_8| 98 -- inst/documentation/html/vande Wiel_8c_18f96560e9861316db1121e8fe69ef07_|only inst/documentation/html/vande Wiel_8c_18f96560e9861316db1121e8fe69ef07_cgraph.md5 |only inst/documentation/html/vande Wiel_8c_18f96560e9861316db1121e8fe69ef07_|only inst/documentation/html/vande Wiel_8c_6bee1e9d657a3174d5a2ecafac2b1d6e_|only inst/documentation/html/vande Wiel_8c_6bee1e9d657a3174d5a2ecafac2b1d6e_cgraph.md5 |only inst/documentation/html/vande Wiel_8c_6bee1e9d657a3174d5a2ecafac2b1d6e_|only inst/documentation/html/vande Wiel_8c_b36f32483d67f870c4dca34aac14f5b9_|only inst/documentation/html/vande Wiel_8c_b36f32483d67f870c4dca34aac14f5b9_cgraph.md5 |only inst/documentation/html/vande Wiel_8c_b36f32483d67f870c4dca34aac14f5b9_|only inst/documentation/latex/dir_551893842a8579748e8cac726fc2aaac_| 16 inst/documentation/latex/| 4 inst/documentation/latex/| 2 inst/documentation/latex/structcel | 2 inst/documentation/latex/vande Wiel_8| 50 - inst/documentation/latex/vande Wiel_8c_18f96560e9861316db1121e8fe69ef07_|only inst/documentation/latex/vande Wiel_8c_18f96560e9861316db1121e8fe69ef07_cgraph.md5 |only inst/documentation/latex/vande Wiel_8c_18f96560e9861316db1121e8fe69ef07_|only inst/documentation/latex/vande Wiel_8c_6bee1e9d657a3174d5a2ecafac2b1d6e_|only inst/documentation/latex/vande Wiel_8c_6bee1e9d657a3174d5a2ecafac2b1d6e_cgraph.md5 |only inst/documentation/latex/vande Wiel_8c_6bee1e9d657a3174d5a2ecafac2b1d6e_|only inst/documentation/latex/vande Wiel_8c_b36f32483d67f870c4dca34aac14f5b9_|only inst/documentation/latex/vande Wiel_8c_b36f32483d67f870c4dca34aac14f5b9_cgraph.md5 |only inst/documentation/latex/vande Wiel_8c_b36f32483d67f870c4dca34aac14f5b9_|only inst/documentation/man/man3/Classes.c.3 | 2 inst/documentation/man/man3/Classes.h.3 | 2 inst/documentation/man/man3/Helpers.c.3 | 2 inst/documentation/man/man3/Helpers.h.3 | 2 inst/documentation/man/man3/Linear Statistic.c.3 | 2 inst/documentation/man/man3/Linear Statistic.h.3 | 2 inst/documentation/man/man3/Streitberg Roehmel.c.3 | 2 inst/documentation/man/man3/_home_hothorn_projects_svn_Rpkgs_trunk_coin_src_.3 | 2 inst/documentation/man/man3/cel W.3 | 4 inst/documentation/man/man3/coin_common.h.3 | 2 inst/documentation/man/man3/vande Wiel.c.3 | 26 - src/vande Wiel.c | 30 - tests/Examples/coin-Ex. R | 15 TODO | 17 inst/CITATION | 10 inst/doc/sv Unit. Moore Title: Block, assign, and diagnose potential interference in randomized experiments Description: Blocks units into experimental blocks, with one unit per treatment condition, by creating a measure of multivariate distance between all possible pairs of units. Since particles are repeatedly copied, it is not an especially efficient implementation. Diff between wasim versions 1.0 dated 2008-12-17 and 1.1 dated 2009-10-28 wasim-1.0/wasim/R/direction.error.

Rnw | 5 accuracy-1.33/accuracy/inst/doc/accuracy_| 2 accuracy-1.33/accuracy/inst/doc/accuracy_| 103 accuracy-1.33/accuracy/inst/doc/accuracy_| 20 accuracy-1.33/accuracy/inst/doc/accuracy_| 385 - accuracy-1.33/accuracy/inst/doc/accuracy_|binary accuracy-1.33/accuracy/inst/doc/accuracy_| 48 accuracy-1.33/accuracy/man/dehaan. Both GDAL raster and OGR vector map data can be imported into R, and GDAL raster data and OGR vector data exported. Diff between rgdal versions 0.6-19 dated 2009-10-05 and 0.6-20 dated 2009-10-30 Change Log | 9 -- DESCRIPTION | 8 ---- R/gdal. License: GPL-2 Lazy Load: yes Packaged: 2009-10-30 UTC; stretch Repository: CRAN Date/Publication: 2009-10-30 More information about gcolor at CRAN Permanent link Description: R package for a non-MCMC approximate multilocus Bayesian model selection approach to the analysis of quantitative trait loci (QTL). The main function bicreg.qtl() is based on the S function bicreg()--- posterior probabilities for models are approximated from the BIC criterion, calculated for each model in a search of model space using leaps or regsubsets. R | 4 TODO | 3 inst/CITATION | 6 inst/doc/|792042 ---------------------- inst/doc/bard JSS-plot1|111605 --- inst/doc/bard JSS-plot1|119722 --- inst/doc/bard JSS-plot2|275962 -------- inst/doc/bard JSS-plot2|535453 --------------- inst/doc/bard JSS-plot3| 944 inst/doc/bard JSS-plot3| 1173 inst/doc/bard JSS.

Diff between meta versions 1.1-2 dated 2009-10-11 and 1.1-3 dated 2009-10-30 meta-1.1-2/meta/Change Logs |only meta-1.1-3/meta/Change Log |only meta-1.1-3/meta/DESCRIPTION | 8 - meta-1.1-3/meta/INDEX | 3 meta-1.1-3/meta/NAMESPACE | 4 meta-1.1-3/meta/R/funnel.default. R | 223 ----------------------------------- meta-1.1-3/meta/R/trimfill.default. Diff between accuracy versions 1.32 dated 2009-05-04 and 1.33 dated 2009-10-30 accuracy-1.32/accuracy/inst/doc/|only accuracy-1.33/accuracy/CHANGELOG | 10 accuracy-1.33/accuracy/DESCRIPTION | 10 accuracy-1.33/accuracy/NAMESPACE | 1 accuracy-1.33/accuracy/R/coef Functions. R | 89 accuracy-1.33/accuracy/inst/CITATION | 2 accuracy-1.33/accuracy/inst/doc/| 1594 ------ accuracy-1.33/accuracy/inst/doc/accuracy_vignette-plot1| 493 -- accuracy-1.33/accuracy/inst/doc/accuracy_vignette-plot1| 542 -- accuracy-1.33/accuracy/inst/doc/accuracy_vignette-plot2| 629 -- accuracy-1.33/accuracy/inst/doc/accuracy_vignette-plot2| 1014 --- accuracy-1.33/accuracy/inst/doc/accuracy_vignette. The GDAL and PROJ.4 libraries are external to the package, and, when installing the package from source, must be correctly installed first. Version: 1.0 Date: 2009-10-12 Depends: R ( Description: Generates a valid colouring of a graph by solving the system of inequations representing the graph. The QTL mapping problem is represented as a model selection problem, where each model is a linear regression of the trait on a selected set of marker values.

Rd | 2 - 27 files changed, 47 insertions( ), 42 deletions(-) Package sv Tools updated to version 0.0-12 with previous version 0.0-11 dated 2009-10-11 Author: Romain Francois Title: Sci Views GUI API - Tools (wrapper for packages tools and codetools) Description: Set of tools aimed at wrapping some of the functionalities of the packages tools, utils and codetools into a nicer format so that an IDE can use them Diff between sv Tools versions 0.0-11 dated 2009-10-11 and 0.0-12 dated 2009-10-29 Package sv Socket updated to version 0.9-48 with previous version 0.9-43 dated 2009-01-23 Author: Philippe Grosjean, Matthew Dowle Title: Sci Views GUI API - R Socket Server Description: Implements a simple socket server allowing to connect GUI clients to R Diff between sv Socket versions 0.9-43 dated 2009-01-23 and 0.9-48 dated 2009-10-29 sv Socket-0.9-43/sv Socket/test CLI/test CLI.r |only sv Socket-0.9-43/sv Socket/test CLI/test CLIcmd.r |only sv Socket-0.9-48/sv Socket/DESCRIPTION | 30 sv Socket-0.9-48/sv Socket/NAMESPACE | 8 sv Socket-0.9-48/sv Socket/NEWS | 43 sv Socket-0.9-48/sv Socket/R/close Socket Clients. R | 89 - sv Socket-0.9-48/sv Socket/R/process Socket.

R | 115 -- sv Socket-0.9-48/sv Socket/R/par Socket. Rd |only wasim-1.1/wasim/DESCRIPTION | 18 wasim-1.1/wasim/R/p.flow_comp.

Despite its flexibility, ROCR is easy to use, with only three commands and reasonable default values for all optional parameters. Diff between DICOM versions 0.12 dated 2005-08-23 and 0.13 dated 2009-10-28 DESCRIPTION | 22 --- man/dicom.

Description: ROC graphs, sensitivity/specificity curves, lift charts, and precision/recall plots are popular examples of trade-off visualizations for specific pairs of performance measures. RXXX |only ROCR-1.0-3/ROCR/unittests/runit.consistency.r | 2 - ROCR-1.0-3/ROCR/unittests/testsuite. R |only 12 files changed, 51 insertions( ), 30 deletions(-) Package RImage J updated to version 0.1-142 with previous version 0.0-142 dated 2009-06-24 Author: Romain Francois, Philippe Grosjean Title: R bindings for Image J Description: Bindings between R and the Image J java based image processing and Analysis platform Diff between RImage J versions 0.0-142 dated 2009-06-24 and 0.1-142 dated 2009-10-28 RImage J-0.0-142/RImage J/R/IJ. This can be downloaded from JGR's website: Diff between JGR versions 1.6-8 dated 2009-09-06 and 1.7-0 dated 2009-10-28 DESCRIPTION | 7 - NEWS | 13 - R/JGR. R | 2 wasim-1.1/wasim/inst/weisseritz/sd__ww100| 352 wasim-1.1/wasim/inst/weisseritz/suz_ww100| 352 wasim-1.1/wasim/inst/weisseritz/ww100|238892 ----------- wasim-1.1/wasim/man/ Diff between ROCR versions 1.0-2 dated 2007-01-30 and 1.0-3 dated 2009-10-28 ROCR-1.0-2/ROCR/unittests/runit. Diff between coin versions 1.0-7 dated 2009-09-29 and 1.0-8 dated 2009-10-30 DESCRIPTION | 8 NEWS | 10 R/Exact Distributions. License: GPL ( Package sv Unit updated to version 0.6-4 with previous version 0.6-2 dated 2009-06-28 Author: Philippe Grosjean Title: Sci Views GUI API - Unit testing Description: A complete unit test system and functions to implement its GUI part Diff between sv Unit versions 0.6-2 dated 2009-06-28 and 0.6-4 dated 2009-10-30 DESCRIPTION | 12 NEWS | 45 R/sv Unit-internal. R |only 26 files changed, 735 insertions( ), 583 deletions(-) Package sv Misc updated to version 0.9-56 with previous version 0.9-48 dated 2009-06-28 Author: Philippe Grosjean, Romain Francois & Kamil Barton Title: Sci Views GUI API - Miscellaneous functions Description: Supporting functions for the GUI API (various utilitary functions) Diff between sv Misc versions 0.9-48 dated 2009-06-28 and 0.9-56 dated 2009-10-29 DESCRIPTION | 14 - NAMESPACE | 1 NEWS | 55 R/Args. Diff between mu RL versions 0.1-3 dated 2009-10-18 and 0.1-4 dated 2009-10-29 Package block Tools updated to version 0.4-1 with previous version 0.3 dated 2009-04-30 Author: Ryan T. The software is designed to be easy to customize to suit different situations and for experimentation with stick-breaking models. Rd | 2 - src/latools.h | 2 - src/rvtools.h | 2 - 7 files changed, 45 insertions( ), 34 deletions(-) Package BAMD updated to version 3.3 with previous version 3.1 dated 2009-10-18 Author: Gopal, V. Diff between BAMD versions 3.1 dated 2009-10-18 and 3.3 dated 2009-10-29 DESCRIPTION | 8 ---- R/gibbs Sampler. R | 6 - src/SNP.h | 7 ------- src/compute Loop.c | 17 -- src/generate_SNP.c | 49 ------------------------------------------------ src/gibbs.c | 16 ---------- src/gibbs.h | 2 - 8 files changed, 36 insertions( ), 75 deletions(-) Package wasim updated to version 1.1 with previous version 1.0 dated 2008-12-17 Author: Dominik Reusser, Till Francke Title: Visualisation and analysis of output files of the hydrological model WASIM Description: Helpful tools for data processing and visualisation of results of the hydrological model WASIM-ETH. van de Wiel and Achim Zeileis Title: Conditional Inference Procedures in a Permutation Test Framework Description: Conditional inference procedures for the general independence problem including two-sample, K-sample (non-parametric ANOVA), correlation, censored, ordered and multivariate problems. A data set considering the demand for health care is also provided. R |only sv Socket-0.9-48/sv Socket/test CLI/test CLIcmd. Provides a method for parsing and processing html code from online job postings of the American Political Science Association. Diff between FSelector versions 0.17 dated 2009-05-18 and 0.18 dated 2009-10-29 Title: Bayesian Sampling for Stick-breaking Mixtures Description: This is a bare-bones implementation of sampling algorithms for a variety of Bayesian stick-breaking (marginally DP) mixture models, including particle learning and Gibbs sampling for static DP mixtures, particle learning for dynamic BAR stick-breaking, and DP mixture regression. Title: Bayesian Association Model for Genomic Data with Missing Covariates Description: This package fits a linear mixed model where the covariates for the random effects have missing values.

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The parametrization can be visualized by printing cutoff values at the corresponding curve positions, or by coloring the curve according to cutoff. It also offer the possibility to simulate PET data. Lau Title: Dunnett-Tukey-Kramer Pairwise Multiple Comparison Test Adjusted for Unequal Variances and Unequal Sample Sizes Description: Functions for conducting and plotting Dunnett's modified Tukey-Kramer pairwise multiple comparison test accounting for unequal variance and unequal sample sizes. Diff between tm versions 0.5 dated 2009-09-10 and 0.5-1 dated 2009-10-27 DESCRIPTION | 8 ---- R/meta.